 Institut für Klinische Physiologie |
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FU Berlin /
HU Berlin |
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Institut für Klinische Physiologie |
>
FU Berlin /
HU Berlin |
Seminar Pathophysiologie: Untersuchungsmethoden und Erkenntnisse
(Neue Studienordnung: Forschungsmodul B; alte Studienordnung: Modul B)
WiSe 2016/17
für Bioinformatiker
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Termin / dates:
planned for 20th - 24th of February 2017, 9 - 13
Jede/r Teilnehmer/in hält ein 35-min-Referat über ein von den Dozenten angebotenes aktuelles Thema der Pathophysiologie
Für Studierende nach der neuen Studienordnung: ohne Benotung, keine Webskripte erforderlich
Für Studierende nach der alten Studienordnung: Teilnehmer erstellen eine inhaltlich gute Web-Skripte Text & Abbildungen; Gewichtung 60% Referat, 40% Webskripte; 4 Credits
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| Anforderungen: maximal ein Fehltermin. |
| Fahrverbindung: U- oder S-Bahnhof "Rathaus Steglitz", dann Bus M85 oder 285 bis "Universitätsklinikum Benjamin Franklin" (Eingang Hindenburdamm) Stadtplan |
| Datum | Referent/in | Themen | Moderator/in | |
|---|---|---|---|---|
| 20.10.2016 4 pm | Dorothee Günzel |
Introduction, topic assignment, fixing date etc. |
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| 20.2.2017 | Dorothee Günzel | Bringing together bioinformatics, pathophysiology, history, evolution and a pinch of intelligent design | ||
| 20.2.2017 | Daniel Whitfield | The herring gull complex is not a ring species | Christian Knauth | |
| 22.2.2017 | Max Driller | The genetic history of Ice Age Europe | Jessica Walde | |
| 22.2.2017 | Xuesong Wang | Y Chromosomes of 40% Chinese Descend from Three Neolithic Super-Grandfathers | Jonathan Baumann | |
| 22.2.2017 | Viktor Dinkel | A practical, inexpensive screening test that could detect and monitor early Alzheimer’s disease (AD) pathology, before irreversible brain atrophy occurs | Pratik Dhakal | |
| 22.2.2017 | Jens Hagemeister | Potential Mechanisms for Cancer Resistance in Elephants and Comparative Cellular Response to DNA Damage in Humans | Boran Adas | |
| 23.2.2017 | Enrico Seiler | The human microbiome: A hot spot of microbial horizontal gene transfer | Svetlana Leng | |
| 23.2.2017 | Christian Knauth | The microbiome of uncontacted Amerindians | Daniel Whitfield | |
| 23.2.2017 | Jonathan Baumann | A draft genome of Yersinia pestis form victims of the Black Death | Max Driller | |
| 23.2.2017 | Jessica Walde | 17th Century Variola Virus Reveals the Recent History of Smallpox | Xuesong Wang | |
| 24.2.2017 | Pratik Dhakal |
The early spread and epidemic ignition of HIV-1 in human
populations |
Viktor Dinkel | |
| 24.2.2017 | Boran Adas | 1970s and ‘Patient 0’ HIV-1 genomes illuminate early HIV/AIDS history in North America | Jens Hagemeister | |
| 24.2.2017 | Svetlana Leng |
Molecular Evolution of Zika Virus during Its Emergence in the 20th Century
additional information: Anticipating the international spread of Zika virus from Brazil Zika virus genome from the Americas |
Enrico Seiler | |
| Selection of topics: | ||||
| New: | ||||
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Progressive Loss of Function in a Limb Enhancer during Snake Evolution |
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| 17th Century Variola Virus Reveals the Recent History of Smallpox | ||||
| Population analysis: | ||||
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Anticipating the international spread of Zika virus from Brazil Zika virus genome from the Americas |
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Computational prediction and analysis of potential antigenic CTL epitopes in Zika virus: A first step towards vaccine development |
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| A draft genome of Yersinia pestis from victims of the Black Death | ||||
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Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity and/or Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis |
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Early Divergent Strains of Yersinia pestis in Eurasia 5,000 Years Ago |
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| Evolution of extensively drug-resistant tuberculosis over four decades: whole genome sequencing and dating analysis of Mycobacterium tuberculosis isolates from KwaZulu-Natal | ||||
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Global population divergence and admixture of the brown rat (Rattus norvegicus) |
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| Population genomics of Bronze Age Eurasia | ||||
| Massive migration from the steppe was a source for Indo-European languages in Europe | ||||
| Mikrobiome analysis: | ||||
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The chemical interactome space between the human host and the
genetically defined gut metabotypes |
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Metagenomic systems biology of the human gut microbiome reveals
topological shifts associated with obesity and inflammatory bowel disease |
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16S rRNA gene pyrosequencing of reference and clinical samples
and investigation of the temperature stability of microbiome profiles |
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| Speciation: | ||||
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Ring distributions leading to species formation: a global
topographic analysis of geographic barriers associated with ring species |
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Evolution and stability of ring species |
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Evolution of the vertebrate claudin gene family: |
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The physiology and habitat of the last universal |
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| Sequencing prehistoric DNA: | ||||
| The 5300-year-old Helicobacter pylori genome of the Iceman | ||||
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Genomic and archaeological evidence |
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| Complete Mitochondrial Genomes of Ancient Canids Suggest a European Origin of Domestic Dogs + Ancient DNA Analysis Affirms the Canid from Altai as a Primitive Dog | ||||
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Ancient human genomes suggest three ancestral populations for
present-day Europeans |
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Reconstructing the DNA Methylation Maps of the Neandertal and
the Denisovan |
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Ancient gene flow from early modern humans into Eastern Neanderthals |
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Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals |
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| Lateraler gene transfer: | ||||
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Bacterial phylogeny structures soil resistomes across habitats |
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Evolution of the F0 F1 ATP Synthase Complex in Light of the
Patchy Distribution of Different Bioenergetic Pathways across Prokaryotes |
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Gene Transfers Shaped the Evolution of De Novo NAD+
Biosynthesis in Eukaryotes |
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Analysis of genomic rearrangements, horizontal gene transfer
and role of plasmids in the evolution of industrial important Thermus species |
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| Miscellaneous: | ||||
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A bacterium that degrades and |
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| Eigene Vorschläge / own suggetions | ||||
| FU Berlin / HU Berlin > Charité > Physiologie / Klin.Physiologie > Bioinformatik > PathoPhysioSem:Top |